YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89155441, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEETISLKEL FYILKKRLAM ILVIAFGAAI VSAIISFFFM TPIYQSSTQI LVNQKKQEGA  60
   61 MIQAGEIQTN IQLTNTYKVI IKSPVVLDQV NEKLNLNMTA QALTGKINVA NEKDSQVISV 120
  121 TAEDKDPKLA RDIANATADV FKGEVAKIMN VDNVTVLSKA EVAENQSPIK PRPMLNVVIA 180
  181 FIVGLMASVG LAFLLEYLDN TVKKEEDVES LLGLPVLGIV ARMDEETASV KSHASSSRKV 240
  241 RGQTIGS

Type	Start	End	Confidence
Cytoplasmic	1	17	0.96
Transmembrane Helix	18	41	0.91
Non-Cytoplasmic	42	173	0.96
Transmembrane Helix	174	195	0.78
Cytoplasmic	196	247	0.80