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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|163942914, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKETMKSQFQ NVRFTLFVAL AVWLKTYIIT RTSFDLKLES FMQEFILFIS PLAASLLFVG  60
   61 LALFAKGKKR NYIALGINFI LTFILVGNVM FYGFYNDFVT LPVLGQTSNF GSLGSSVKEL 120
  121 FNYKIILAFA DIIVFFVLLK KKKDFAPTER VARPMRSLYF VSTVAIFCVN LGFAEAERPE 180
  181 LLTRSFDRVM LVKNLGLYVH QAYDLGLQAK SSSQKAFADS SKLQEAENYV KTTQSKPDPN 240
  241 MFGTAKGKNV IVVSLESLQT FLIGAQVNGQ EVTPFLNQFA KESYYFDNFF HQTGQGKTSD 300
  301 AEFLVDTSMY PLDRGAVFFT HGNNEYTATP EILRQQGYHT SVFHANNATF WNRNIMYPAL 360
  361 GYDRYYNELD YKITPETKLN WGLKDIEYFD QSIDMLKEVK QPFYTRFLTL TNHYPFTYDD 420
  421 STKLIDEYNS GDGVFDRYMV TARYLDEAMK HFIERLKAEG IYDNSVIVFY GDHYGISENH 480
  481 NRAMAQFLGK EEITTFDHMN LQKTPMFIHV PGQKEGKTIS KPTGEIDIKP TILNLLGVDS 540
  541 TNQIQFGHDV FSPENKGFVV LRDGSFVTDK YMYTNSTFYD RTTGEVVQLP KEESQPLIDR 600
  601 AQNELNMSDK IIEGDLLRFS ESNKIKTGEV KTAIKEEKKS AE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle