YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|228748680, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFRNTRLAM VTLSSFFILG TASLSFTDII HGEVASASPQ EIIVKSYDDT YYNNAIGKMG  60
   61 LELKKELHNI IDDHTKLSYS AVWEALRDTD EDPNNKNNVL LLYTGRSQGK LTNGSGVDNW 120
  121 NREHVWAKSH GDFGTTAGAG TDLHHLRATD VSVNSSRGNL DFDNGGVNHS EATECKYDSD 180
  181 SWEPRDSVKG DIARMLFYMA VRYEGDNGEI DLELNEKVNN NKDPYMGKLS VLLKWNEQDP 240
  241 VDDLERKRNE VIFTKYQHNR NPFIDHPEWV NKIWN

Type	Start	End	Confidence
Signal Peptide	1	25	0.97
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	275	0.99