YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89155521, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTRSQITFA SLALLIAGSS LLYTTPASIV KAEPTQNVSS SLQTSTQRDR TSVKQAMRDT  60
   61 LQLGYPGILA KTSEGGKTWS YAAGVADLSS KQPMKTDFRF RIGSVTKTFT ATVVLQLVGE 120
  121 NRLNLDDYIE KWLPGVIQGN GYDGNQITIR QILNHTSGIA EYSRSKDADF TDTKKSYTAE 180
  181 ELVKMGISLP PDFAPGKGWS YSNTGYVLLG ILIEKVTGNS YAEEIESRII EPLELSNTFL 240
  241 PGNSSVIPGT KHARGYVQPD GVSELKDVTY YNPSAGSSAG DMISTADDLN KFFSYLLGGK 300
  301 LLKAQQLKQM LTTVPTGKEG IDGYGLGIYE TKLQNDVSIW GHTGGILGFT TLVGGKLGGK 360
  361 HTLVVNWNSL GRADSPNPFK NILLAEFGK

Type	Start	End	Confidence
Signal Peptide	1	32	0.91
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	389	0.99