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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89155520, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNKLSGVLA ATLALTMILP TGAIASSSSK TPVVANQEVV NQELEKIAAE KAALLTKSYG  60
   61 TTSVQYALID NGKLILSGQT GKNDMEGKQR LNKDTLYGIG SVSKMYATAA VMKLVDEGKV 120
  121 DLDAPVVHYV PDFKMKDERY KRITPRMLLN HSSGLQGSTL SNAFLFNDND TYAHDVLMRQ 180
  181 LSTQSLKADP GAFSVYCNDG FTLAEILVER VSGMSFTEFI HQRFTEPLQL NHTKTPQDKW 240
  241 EDDKRAGLYF PAYQGKLPIE SVNVIGSGGI SSTAEDMVRF SQLFMGQGKG ILSDKAVKAM 300
  301 EQEEYKKGMW PGDGGNIFNY GLGWDSVKLY PFSEYGIKSM AKGGDTTLQH AILVVLPEQK 360
  361 MAVAVLSSGG QSSTNQLLAT ELLLAALKEK GTIKDIKPNK SFGKPVKAKM PQDVTKKAGF 420
  421 YGNSESHFKI EITKNGELFL PSNREEKYVY TANGSFINEK GTSKLNFVTE KNGSTYLKVS 480
  481 TYKSTPGLGQ NVMTHYLAEK LEDNVLSKKT AAAWAKREGV KFYLVNEKFS SIEYLVQPKL 540
  541 ITTQITRKEG LEGYWDGRKI TGPNTAAHQL QIPVMNGRDT TETHFYTEGG SEYMEMAGLL 600
  601 YVSGSNVKPL DAGQSSKVTL QANGHAKWFT IPQATAGKTM SVTLSSKSSF AVYDEKGVCV 660
  661 NFTVVSGNNK VKLPKNGSVV FAGAPNSEFA ITLN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle