YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|163863244, gi...
Protein type:	Transmembrane
Type Confidence:	0.89
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMRLKLVGTL TCIVVMLGIF IIYTNISIGK EPYKTNHETS ENSINKEKNS KQNGTSNKIA  60
   61 SSFASIQAVV NKEYGLPEDY MPEDLVVPNV PFSFSGTVEK SHLRKEAAEA LEKLFLLAKQ 120
  121 DGIQLNAVSG FRSYEYQKGL YANNVKKKGQ EHTDRFSAKP GHSEHQTGLT MDVSSKSANN 180
  181 ELELSFANTK EGKWLKENAH RAGFIIRYPK GKESITGYAY EPWHIRYVGD IAENIYKEKL 240
  241 TLEEYMNL

Type	Start	End	Confidence
Cytoplasmic	1	6	0.74
Transmembrane Helix	7	26	0.85
Non-Cytoplasmic	27	248	0.90