YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89155630, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.58
Topology Confidence:	0.25
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKEPKIGLAL GSGGAKGFAH IGVIKVLREA GIPIHMIAGS SIGALIGTFY AASCDVERLY  60
   61 RLAAVFKRKY YLDFTVPKMG FIAGKRIKDM IKMFTYNKNL EELDIPTAVV ATDILKGEKV 120
  121 VFTSGPIAEA VRASISVPGV FVPEKIDGRL LVDGGVIDRI PVSVVKDLGA DIVIAVDVSP 180
  181 IKVNGEVTSI YDVIMQSIEI MQHELVMNRQ IASDLMMRPA VEQFSSRAFT HIEDIIRVGE 240
  241 VEAEQHISNI YLLIEQWKEK HNV

Type	Start	End	Confidence
Cytoplasmic	1	5	0.48
Transmembrane Helix	6	20	0.25
Non-Cytoplasmic	21	263	0.67