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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89206293, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGQWGYVAI SFIIGIAITF SASHLLAACC FVCYVLFCLY RTSRKTFIFC IIACFSGVMY  60
   61 TTYVQSLNKP LGDSYEVTRG VVQNTPLING DRLSFQIEDQ NKNLVQLNYK IQSASEKKQL 120
  121 QQLHAGISCT FKGEVKEPQT ARNFHVFDYR NYLYQQKIHF IFDVTYISEC QKTSLSLVQW 180
  181 IFLLRQQTIS KVTEMFPEQS GAFMNALLFG DRQQMTFEVE EQYQQFGLIH LLAISGSHIV 240
  241 LLMVIMYFVL LRSGVTKEAA TVCLIVCIPL YMIIAGASPS VVRASITGVL LLVAFMCSVR 300
  301 LSSLDALSIT AICMLIYDPY LIFNIGFQFS FVGSFSLLLS APILLGRSNG IVRNSIYISI 360
  361 ISQLASTPIL LYHFGYFSPY SIFLNLIYVP FLSIIVLPCS IIILICMPVI PFFAKGIAYV 420
  421 LSLCLTISND FLSYCESFPF IRLTFGQTPL FLVAIYCFSI VSIFVIWERV ITKKILCIVV 480
  481 GVFLFISTCH YVYPYFRESG SVTFLDVGQG DAILIRLPYD KEVYLIDTGG ALSVKKEAWQ 540
  541 QKKHEFSVGH DILVPFLQKE GIKTIDKLIV THGDADHIGA ALDLLSSIIV KEVVFGRKEQ 600
  601 DAVLEKVVKK KALEKSMKIS VVGEGEGWRV NEAEFFVLAP KGKEKGENDS SIVLWARLGG 660
  661 LTWLFTGDLE EEGEKFIVSI YPDLRANILK VAHHGSKTSS TDPFLSLVQP AVAIISVGER 720
  721 NRYGHPHKEV IERFKKMGID IWRTDKQGAI SYVFNGEKGT FQSKITYDET HRR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle