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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|163938579, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNKPNFFKV LSTLAVSTLL LSACGGSGGS EKTSSTKKVD TNKFSTTVKN DKKEIKDGSL  60
   61 TYGLVSNTPF EGLLNFAVYE GDPDNQVLTI FDESLLSNDK NWEYTNDGAA TYELSEDKKT 120
  121 ITLKIKDNVK WHDGNPVTAE DLEYSYLVIG SKLYAGSRYD SQMQMIEGME DYHNGKSEKI 180
  181 SGIKVTDPKT ISITFKEPNP SVKTGLWTYP LHKKYLGDVP IDKLAESDKI RKNPIGFGPF 240
  241 KVKKITPGES VEFERFDDYY GGKPKLKSMV LKVVNPSVVN ASLKNGDIDI AEVSADQYPN 300
  301 VSQLKNAQLL GKTDLYYSYI GFKLGHMDKE KEEVVMDKDK FKDVRVRQAM AYAIDRKEIG 360
  361 EKLYHGLRYP ANSPIPPSLP KYHNNKVGSY DKDVEKAKKL LDEAGYKDTN GDGFREDPNG 420
  421 KEFKANFLSM SGSDVSEPLA KFFIQSWKDI GLKVELLDGR LHEFNSFYDM IKKDDPKVDI 480
  481 FSGAWGTASD PDPSGIWAKN ASFNYTRWSN DKNNELLKQG ISPAAADEKY RKDVYDKWQK 540
  541 LIHDEVPLIP LHYKFDLKGV NNRVKDYKYT PEDQYKWGNV SVTSDKAETE K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle