YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|228651874, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKMKKLFTL IVFSCLFVLV VAGCGSKKDE AKETNTKQDG AVEQIKKRGK LVVGVKNDTN  60
   61 LFGLKNPSTG QVEGFDVDIA KALAKKILGD EKKLELKEVT SKTRIPLLKN GDIDAIIATM 120
  121 TITEERKKEV DFSDVYFKAG QSLLVKKGSD IKSIDDVKKG VKVLAVKGST STNNIRQKSP 180
  181 ESTVLEFENY SEAFTALKAG KGDVLTTDNA ILYGMAKQDS NYEVVGKIFT DEPYGIAVQK 240
  241 GADDLTKEIN SLLKDMKANG EYDKLYEKWI GQKQEK

Type	Start	End	Confidence
Signal Peptide	1	26	0.94
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	276	0.99