YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89156146, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQTMNPKLK KYKRLFFTVM FSCVLFFVFS FFIIIIAAKI MGPPPVAVPQ TSVFYANDDT  60
   61 VIGQSNETQK RYNVSLDEIS PYVKEATLSI EDQRFYKHHG FDIKRIVGAI VADLKAMAKV 120
  121 QGASTITQQY ARNLYLDHDK TWKRKLLEAM YTVRLEVNYN KNHILEGYLN TIYYGHGAYG 180
  181 IEAASRLYFD KTAKELTLAE ASMLAGIPKG PSFYSPFLKE ERAKGRQSLI LDEMVEQGYI 240
  241 TKQQAASAKK EPLTFASLDT KKVAEVAPYF QDAVQASLLR DIGLDEQALQ RGGLRIYTTL 300
  301 DPKLQSVAEQ AVKNHIPETT NIQTALVSMN PKTGEVAALV GGTDYNTSQF NRATQAARQP 360
  361 GSTFKPFLYY AALERGFTPA TRLKSEYTVF TLGDGVSKYK PKNYKNYYAD DFVTMAQALA 420
  421 VSDNVYAVKT NLFLGEDILT KTAKQFGITS ALKDVPSLAL GTSPVKPIEM VNAYSMFANG 480
  481 GKEVKPIFIR RIVDHEGNML YDAHLESKQV LDKSKAFVME EMMAGMFNKK LSSYAAVTGQ 540
  541 SMLSKLSRTY AGKSGSTETD SWMIGFTPQL VTGVWIGYDQ PKSISNVAEQ GYAKKIWTDT 600
  601 MEKGLDGQPK QEFKQPADVV AVDVNPENGK IATKNCPISV KMYFAKGTEP TEYCMDHVDD 660
  661 KEEFEKVSEE KKKAGWWKKY LPW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle