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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|163861181, gi...
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPLWFVSII SILLKNFEDY IHKDTSFSNN KCTIIWKEGR CMKKAKWTLL GGVATLVVAI  60
   61 VLYKLIVLTG GYMMDEKQLV FHSSSRIVDQ KGKEITKLYV ENRELVPIEE IPKYVQQAFI 120
  121 AVEDARFYEH QGIDYPSIFR ALYKDALAGE KVEGGSTITQ QLAKNVFLTR EKTFTRKLKE 180
  181 VAISLQLEQK YTKQQILEMY MNHIYFGHGA YGIQAAAKLY FNKNVEDLTV EEGAMLAGLP 240
  241 KAPNGYSPYL SLEKSKGRRD LVLSLMHKQG YLTAEDSVRY QGKTIALYKN SDERELAYMP 300
  301 YIDMVIDEAA RLYGLSHQEV LRGGYTFVVP MDEKVQKVAY NQFQDARNFP GKENGAQGAF 360
  361 LLMDNQTGGI KAAIGGREYV PRGLNRVFAK RQPGSVLKPL IVYGPALETK KYNPYSLLTN 420
  421 EKSSFEGYEP RNYNHEYTKE MTMYDAVLES ANVPAVSLLN ELGVDEGKQY LEKGNVHIAD 480
  481 SGLSTALGGL KNGVSPFDLV KMYRSFLANG NIIEPHVIDK VLNRHGAVIG ESSKAETKVF 540
  541 SKQTAWYMTK MLEGVVKEGT AKAGVYNGAL AGKTGTTSLP NDDNGARDMW FVGYTPNLVG 600
  601 AVWIGYDRTD KEHQLQDGNA SATMLFKKIL TKANIQDKAS FHRPKGVETI GLPIRLDKIQ 660
  661 NVEAKLAFSP FGLFAMKLSW TPLPDERIMY RIYKVEKGIH THVGTAKGTG KYEEKFINIF 720
  721 SKPSFYVVPY NTQTNREGEK SKVAKP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle