YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|163862331, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNRILKHLQ NMKMNKKSLG AVALTAGIIG TTLIPQNAYA HGFVEKPGSR SALCSPTYGV  60
   61 LNMNCGSVMY EPQSLEAPKG FPQGGPVDGQ IASAGGKFGG ILDQQTADRW FKNTITGGEN 120
  121 TFTWKYTAPH LTSQWHYYIT KKNWNPNKPL TRADFEPIGT VQHDGSAASN NLNHKINVPT 180
  181 DRSGYHVILA VWDVADTANA FYNVIDVNLV NNEKPDTEAP SNPNGLEARK VTANSVELAW 240
  241 NASTDNVGVK GYQVLRNGEI IDTVPGTHFI DKQLQPSTEY SYTVKAIDAA GNVSKVSTAV 300
  301 KVKTSVATLD TEAPTQPKGL HSMGTTASSV DLMWSPSDDN DGVDHYDIYR EISGVMKKIG 360
  361 ISNTTSHMDK NLLANTTYKY TVKAVDVAGN ESAQSDVFTV TTKTESASYE AWDSKKAYKK 420
  421 GDRVVHEGKV YEAVQNYQGN GDPNWIYALS LWKTV

Type	Start	End	Confidence
Signal Peptide	1	40	0.80
N-region	1	31
H-region	32	37
C-region	38	40
Cleavage Site	40	41
Non-Cytoplasmic	41	455	0.99