YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|163861052, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYIPNMITI ANFVCGLLAI FAILVHDMYL GAVFIITGML FDFFDGMVAR KLDSVSEIGG  60
   61 ELDSFADLVT FGVAPSILAY SVSLKDLHFI GMLCALAYSI CGMLRLARFN TQQSKLPTFI 120
  121 GMPIPFAAMC LLILCFLNNP VSVAFGTCIL AYLMVSKMKF PHFKKDISES LKSERWN

Type	Start	End	Confidence
Cytoplasmic	1	7	0.85
Transmembrane Helix	8	37	0.79
Non-Cytoplasmic	38	86	0.57
Transmembrane Helix	87	107	0.92
Cytoplasmic	108	115	0.79
Transmembrane Helix	116	137	0.84
Non-Cytoplasmic	138	140	0.72
Transmembrane Helix	141	160	0.77
Cytoplasmic	161	177	0.80