YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|163939679, gi...
Protein type:	Transmembrane
Type Confidence:	0.71
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKNIIITIV TLFIITVALF GTYKLMNARS FQLFGGLTNR VETNEKVIAL TFDDGPTNNV  60
   61 KQILPLLDTY NAKATFFLIG NELEKNLSLG EDIVQSGHQI GNHTYSHNRM VFKTPSFIKE 120
  121 EIEKTNWIIR QTGYTDKIDF RPPNGKKLIG LPYYLNKNNI ETITWDLEPD TFYTSTADKI 180
  181 QYVSKNVKPG SIILLHPMYD ESNENLQTIE GILDSLSKKG YQFVTVNELQ KKAK

Type	Start	End	Confidence
Cytoplasmic	1	4	0.62
Transmembrane Helix	5	26	0.64
Non-Cytoplasmic	27	234	0.91