YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89204977, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKLFKEVRK LIYIIVGIAG ILGALSRYFL GLTIHTFWHH SFPLATLLIN LAGCFLLAWL  60
   61 TTYIARLNIL PSEVITGIGT GFIGSFTTFS TFSVETVQLI NHSEWSTAFL YVSCSILGGL 120
  121 IMSGLGYTLG DFLIKKHLTE GDYS

Type	Start	End	Confidence
Cytoplasmic	1	10	0.96
Transmembrane Helix	11	31	0.95
Non-Cytoplasmic	32	41	0.75
Transmembrane Helix	42	63	0.90
Cytoplasmic	64	73	0.73
Transmembrane Helix	74	94	0.88
Non-Cytoplasmic	95	107	0.85
Transmembrane Helix	108	129	0.95
Cytoplasmic	130	144	0.94