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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89204697, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNWYSKTKN QTLIDLETNE QHGLTDKIVN ERLKQYGSNE LATKQKRTLW QRVFAQINDV  60
   61 LVYVLIIASL ISAFVGEWAD ASIIALVVVL NAVIGVIQES KAEQALEALK KMATPKAIVK 120
  121 RDGELKEIPS EHVVPGDIVM LDAGRYIPCD LRLIETANLK IEESALTGES VPVDKDAVYH 180
  181 PSMQNDEQVP LGDQKNMAFM STLVTYGRGI GVAVETGMHS QIGKIATLLH EADDDMTPLQ 240
  241 KSLAQVGKYL GFVAVAICTT MFLIGFLQGR DTLEMFMTAI SLAVAAIPEG LPAIVSIVLA 300
  301 IGVQRMIKQN VIIRKLPAVE ALGSVTIICS DKTGTLTQNK MTVTHFYSDR TYDQLENLNV 360
  361 NNDAHRLLLE NMVLCNDASY GADSQTGDPT EIALLVAGSS FNIQKDHLEN KHERVNELPF 420
  421 DSDRKMMSTV HTYDEGYYSM TKGAIDKLLP HCTHIFINNK LEVLKDSDKN QILEAAGSMS 480
  481 QEALRVLSFA YKRYDLNDMD INHLEENLIF IGLVGMIDPP RTEVKDSITE CKKAGIRTVM 540
  541 ITGDHKDTAF AIAKELGIAE EISEIMIGTE LDNIPDTELA SKINHLNVFA RVSPEHKVKI 600
  601 IKALRAKGNI VSMTGDGVND APSLKQADVG VAMGITGTDV AKGAADVVLT DDNFSSIVKA 660
  661 VEEGRNIYRN IKKSILFLLS CNFGEIIALF LAILLGWATP LRPIHILWVN LITDTLPALS 720
  721 LGVDPEDPDV MKEKPRHAKE SLFSGSVPFL IFNGVVIGLL TLTAFIVGAK LYTGDTNLFP 780
  781 LFPEQIDEDA LLHAQTMAFV VLSFSQLVHS FNLRSRTKSI FSIGIFTNKY LVFSLLIGVL 840
  841 MQVCIISIPP LANIFGVHAL TMRDWGLVLL LSIIPLVVNE IIKLFKRK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle