YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|163939190, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKKPFKVLS SIALTAVLGL SFGAGSQSVY AETPENKTAT SPVDDHLIPE ERLANALKKR  60
   61 GVIDSSASGT ETKKAVEKYV EKKKGENPGK EAASGDQLTK DASDFLKKVK DAKADTKEKS 120
  121 EQPANGTTAG TGPVRGGLNG KVPTSPAKQK EYNGEVRKDK VLVLLVEYAD FKHNNIDKEP 180
  181 GYMYSNDFNK EHYEKMLFGN EPFALEDGSK IETFKQYYEE QSGGSYTVDG TVTKWLTVPG 240
  241 KAADYGADAG TGHDNKGPKG PRDLVKDALK AAVDSGLDLS QFDQFDQYDV NGDGNQNQPD 300
  301 GLIDHLMIIH AGVGQEAGGG KLGDDAIWSH RWTVGPKPFA IEGTQAKVPY WGGNMAAFDY 360
  361 TIEPEDGAVG VFAHEYGHDL GLPDEYDTQY SGDGEPVEAW SIMSGGSWAG KIAGTTPTSL 420
  421 SPQNKEFFQK TIGGNWANIV EVDYEKLNKG IGLATYLDQS VTKSDRPGLI RVNLPDKDVK 480
  481 GIQPAFGKQY YYSTKGDDLH TTMETPLFDL TKATTAKFDY KSLYEIEAEY DFLEVHAVTE 540
  541 DGQKTLIERI GEKANSGNAA TTNGKWVDKS YDLSQFKGKK VKLVFEYITD GGLALNGFTL 600
  601 DNASLTVDGN VAFSDDAEGT PQFKLDGFVA SNGMDKKKHN YYVEWRNYAG SDNALKFARG 660
  661 PVYNTGMVVW YADSAYTDNW VGVHPGHGFL GVVDSHPEAI AGTLNGKPTF TSSTRFQIAD 720
  721 AAFSFDKTPA WKVVSPTRGT FVYDGLPGVP KFDDSKKYIN EQIPDAGRIL PKLGLKFEVV 780
  781 GQADDNSAGA VRLYR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle