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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89157505, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKSYIKALV VATTLAIPFA AYSTPALAAI KIEANQSVAA ASDRTYDTEI KIYKDQKDEP  60
   61 SMVSQYIKNP KVAIEDGKKI VTVTIQDSDY FQYLRIEDRN QPGVFHDVKV LSEDKRKNGT 120
  121 KVVQFEIGEF EQKHNMQMHI FIPAIGYDHK YQVQFEIKDP TVGEKETEKP DDNSNSGNTE 180
  181 TDNPVDNQNM IIDNKLRELV NKKVFNRKDL NTPITKEELL QVKDLFLNTN EILDYSALKY 240
  241 MPNLKSLTVA NAKITDPSFF ANLKQLNHLA LRGNEFSDVT PLVKMENLES LDLSNNKITN 300
  301 VAPLIEMKNV KSLYLSGNQI EDVTALAKME QLDYLNLANN KITDVAPLSA LKNVTYLTLA 360
  361 GNQIEDIKPL YSLPLKDLVL TRNKVKDLSG IDQMNQLNKL FIGKNQIEDV TTLAKMTQLT 420
  421 ELDLPNNELK DITPLSNLVN LQKLDLEANY ISDLSPVSKL NKLVYLSFVA NEIRDVRPVI 480
  481 ELSKKAYINV QNQKVFLEDT EVNKEVKVPI YEKDGEVSTK IRLKSDGGTY SNGVVKWSTP 540
  541 GEKVYEFGVK DPFADTGIFF TGSVIQNVVE SKGDNNSKED NTSKEDEKVE VVEFKDVPKG 600
  601 HWSEEAIHYL AKENIFKGYG NGQFGFGDSI TRGQVASLVQ RYLKLENKVE QKEMFTDTKG 660
  661 HMFEQDIATV AQAGIMQGDG TGKFRPEGVL TRYEMSVVLQ KVFQLNENEN NLENFTDVPT 720
  721 GHWAEGYVKA LVDNNISKGD GNGNFLGDDF VTREQYAQFL YRAIKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle