YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|163943311, gi...
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNITNIKRI VITIVAIAIA IGYFMFQTIT SSATAVAKQE NPVQLVSAQP ETEIKKAVPV  60
   61 RLNGQERKVA YLTFDDGPGK YTAQLLDILK ENDAKATFFL IGQNVKSYPE LVKREEVEGH 120
  121 YVGMHSMTHD YKKLYTQAGY VDEMKEDQSL IASILGHAPK LTRPPYGSMP GLHEELRNKA 180
  181 VEDGLRVWDW TIDSLDWEYN SVPIDTAKAK IVQNVLAGAT DPKEVILMHD IHPQSVAAVP 240
  241 AIIKGLKEKG YEFEAYHEDD HFPLNFMHDK RM

Type	Start	End	Confidence
Cytoplasmic	1	9	0.81
Transmembrane Helix	10	29	0.84
Non-Cytoplasmic	30	272	0.99