YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|152022748, gi...
Protein type:	Transmembrane
Type Confidence:	0.54
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFFFFITSKR KFKHISFIIV LSLFTAWMLF LKTYSHESAF STATGPKVIY KGDTAKKQVA  60
   61 LTFDISWGDK KAMPILDTLK ERDIKNATFF LSAAWAERHP DIVERILKDG HEIGSMGYSY 120
  121 TPYTSLEANE VRKDLLRAHD VFEKLGVKQL TLLRPPSGDF NKTTLKVADS LGYTIVHWSN 180
  181 NPNDWKNPGV DQIVSSVSNH LRGGDIILLH ASDSALQTNK ALPLLLQKLK SDGYEPISIS 240
  241 QLISNTNAKS KNVNSTIH

Type	Start	End	Confidence
Cytoplasmic	1	11	0.51
Transmembrane Helix	12	31	0.50
Non-Cytoplasmic	32	258	0.97