YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89203479, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MREPKIGLAL GSGGAKGFAH VGIIKILRES NIPIDMIAGS SMGALIGTFY ATNCNVERLY  60
   61 RMASVFKRKY YLDFTVPKMG FISGKRVKDM IKMFTYNKKM EELEIPTAVV ATDILKGEKV 120
  121 VFTKGSIADA VRASISVPGV FVPEKIDGRL LVDGGVIDRI PVSVVKDLGA DIVIAVDVSP 180
  181 IKVNGEINSI YDVIMQSIEI MQYELVVNRQ TASDLMMRPT VEQFSSRAFT NIEEIIRVGE 240
  241 EEAKKHIQDI YLLIEQWKEK NNV

Type	Start	End	Confidence
Signal Peptide	1	19	0.47
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	263	0.82