YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89148540, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRLRWGRVT ILLAVIFGIC WFVFHEGLGK DDRDIAKAKE NLLIEGQPLQ VAELPKLGVS  60
   61 EKVIPQKYLP VVEAKAAIII DASDGEVIYQ NNENETFAPA SMSKMMTAYL LLENIHKGKV 120
  121 HWEDQVKISA KSAQTEGAKI PLQMNDVVTV KDLFHALMIQ SANNAAVALA EHMAKTEKNF 180
  181 VQIMNQKAKD LELSNKTKFA NASGLQEPDG SETKMPAADV AKLAYHLIKE YPEILEVTHL 240
  241 RRSQLAFKNI SVTSTNEMLN TANKNLHIEG MDGLKTGFTD SAGYCFTGTA KQGDKRIITV 300
  301 VMGTKSQTKR FTETHKLMSY GFEFVNERKE HEETSYLKK

Type	Start	End	Confidence
Signal Peptide	1	29	0.68
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	339	0.99