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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|152023130, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKPKFFKVL STLAVSTLLL SACGGSGGNE KSSNSSKTTD TKKFSTAVKN DKKEVKDGSL  60
   61 TIGLVSDTPF EGLLDFSVYE SNPDWRILTI FNESLLTNND DWEYTNDGPA TYELSEDKKT 120
  121 VTLKIKDNVK WHDGNPVTAE DLEYAYLVIG SNKYTGARFD SQMQLIEGMD EYHSGKAEKI 180
  181 SGVKVIDDKT ISITFKEPNP SVKTGLWTSP INKKYLGDVP IDKLAESDKV RKNPIGFGPF 240
  241 KIKKITPGES VEFERFDDYY GGKPKLKNIV LKVVNPSIVN ASLKKGDIDI AEVSADQYPN 300
  301 VSKLKNIQLI GTTDLYYSYI GFKLGHYDKE KKESVMDNDK FKDVRLRQAM AYAIDRKEIG 360
  361 EKLYHGLRYP ANSVIPPSLP KYHNNKVGSY DKDVDKAKKL LDEAGYKDKN GDGFREDPNG 420
  421 KEFKINFLSM SGGDTSEPLA KFFIQSWKDI GLKVELLDGR LHEFNSFYDM LKTDDPKVDV 480
  481 FAGAWGVGSD PDPSGIWAKE APFNYTRWVN DKNTELLQEG ISPKAADEKY RKDVYDKWQK 540
  541 LVHDEVPLIP LHYKFELIGV NNRVKDYKYN PEDRYKWGNV TVTSEKPEVE K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle