YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|152022627, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHTNKVYEL YLRREKMNST LVIVSILTLV FILLIFGASL KPIRFIGKVV ARVIIGVTLL  60
   61 FIVNIIGTYF DFHLPINVGT ASVSSLLGIP GIFALVIIKL YIMPG

Type	Start	End	Confidence
Non-Cytoplasmic	1	18	0.58
Transmembrane Helix	19	40	0.92
Cytoplasmic	41	48	0.54
Transmembrane Helix	49	70	0.91
Non-Cytoplasmic	71	77	0.50
Transmembrane Helix	78	102	0.86
Cytoplasmic	103	105	0.54