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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CARB_BACCN
Protein type: Globular with Signal Peptide
Type Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKRLDINTI LVIGSGPIVI GQAAEFDYSG TQACQSLKEE GYKVILVNSN PATIMTDTAT  60
   61 ADKVYIEPLT LEFVSRIIRK ERPDAILPTL GGQTGLNMAV ELAKSGVLEE CGVEILGTKL 120
  121 SAIEQAEDRD LFRTLMQELN EPTPPSEIVH TLDEAYEFVK EIGYPVIVRP AFTLGGTGGG 180
  181 ICHNEEELIE IVTSGLKHSP VTQCLLEKSI AGFKEIEYEV MRDANDNAIV VCNMENIDPV 240
  241 GVHTGDSIVV APSQTLSDRE YQMLRNTSLR IIRALGIEGG CNVQLALDPY SFQYYVIEVN 300
  301 PRVSRSSALA SKATGYPIAK LAAKIAVGLT LDEIVNPVTQ KTYACFEPAL DYVVSKIPRW 360
  361 PFDKFESANR TLGTQMKATG EVMSIGRNLE ESLLKAVRSL ELGIYHLELN HLKELDKETM 420
  421 KKRIIKADDE RLFIVAEAIR QGVTKEEIHE WCEMDFFFLQ KIENIVNMER KVKANVGDME 480
  481 VLREAKEMGF SDHYIASAWN KTECEIYATR KENGIMPVFK MVDTCAAEFE SATPYYYSTY 540
  541 GDENESIVTE RKSVMVLGSG PIRIGQGVEF DYATVHSVWA IKEAGYEAII VNNNPETVST 600
  601 DFSISDKLYF EPLTIEDVMH IIDLEKPEGV IVQFGGQTAI NLAAKLAERG VKILGTSLED 660
  661 LDRAEDRDKF EAALTELGIP QPVGKTATTV EQAVAIAEEI GYPVLVRPSY VLGGRAMEIV 720
  721 YRQEELLHYM KNAVKVHADH PVLIDRYMVG KEIEVDAISD GENVYIPGIM EHIERAGVHS 780
  781 GDSIGVYPPQ SLSAKVKEQI IENTIALGRG LKIVGLLNIQ FVVFKDEVYV IEVNPRASRT 840
  841 VPFLSKITGV PMANIATKVI LGKNLVEQGY ETGYHPEDNE VYVKAPVFSF AKLRSVDTTL 900
  901 GPEMKSTGEV MGKDLTLEKA LYKGLVAAGI SIPTHGSVII TVADKDKEEA IEIARRFHEI 960
  961 GYNLLATAGT AKSLTEQNIP VQVVNKIDSE DYNLLDIIRQ GKAQFVINTL TKGKQPARDG1020
 1021 FRIRRESVEN GVACLTSLDT TRAILRVLES MTFSAHTMKE IAPTTRHEVV HA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle