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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|152023753, gi...
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLWRSVVGKL WMTILLLVSF VLGFVAILLS QFFRTYYVDL SETRLTKVAQ SVTELVEEGA  60
   61 DVKTIENIAY KFSDPLSRII IVKDGKEFSA SPKQEGLVTL TIDDLKADKE LAAVFINQKE 120
  121 NKNKIRQFPD GKTKQSSEND IMIVGKPLKG TKNSAVFVYE SLQVPIKGME KATDFIFLSA 180
  181 GIAIILTTFF AFFLSTRITA PLRKMREVAF EVARGKFDAK VPMVSQDEIG ELATALNQMG 240
  241 KQLKFNMNAL QQEKEQLSSI LSSMADGVIT LNQEGEVVVI NPPAEHFLQV WQEENDLELS 300
  301 RNLPPELVEQ FHFVAESEQQ QVIEMNLQKG NYVVLMTPLY NQTKIRGAVA VLRDMTEERR 360
  361 LEKMRKDFIA NVSHELRTPM VMLQGYSEAI LDDVVQTKEE INEFVQIIYD ESVRLGRLVN 420
  421 ELLDLARMES GHVELHMSEV EIHPFVEKIG RKFQGIAQDK GVKLTVDFRT EVTEHTFDPD 480
  481 RLEQVLTNLI DNAIRHTSAD GHVKLVIDKK DAGIVFEVQD TGAGIPEEDI PFLFDRFYKA 540
  541 DKARTRGKTG GTGLGLAIAK NIVQSHDGKI SVSSVVGEGT TFFVYLPNHA L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle