YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DIVIB_BACCN
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNSKVIKLQ DRVPKLKNQK KRNKPPVNHR LILYISILFL LVLFLIYFRS PLSNIKKISV  60
   61 FGNHYMTDEQ VMEKSGITYK TSYFRVTARQ AEENLKKQIE IKSVDVKKRF PNKIDIHIEE 120
  121 YVTIGYINKN GKLQPLLENG KTLDILPSGK LPVAAPIFEP FKEEKMKELI SELEKLTPTI 180
  181 LRSISEIRYT PTTSNESHLT LYMNEGYEVS TTIQDFAKRM EAYPLILKQI EPGRKALIDL 240
  241 EVATYFKYLD DEKKK

Type	Start	End	Confidence
Cytoplasmic	1	29	0.92
Transmembrane Helix	30	48	0.96
Non-Cytoplasmic	49	255	0.97