YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89202886, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKKVVIMFL LCFLVFGSVY YFCREPKEQK LLTSKVTPSV QSELHDSIEE KKESPIDYAS  60
   61 IAQKLDQYLK DRAFNGTVLV TDKEHIILNK GYGYADVQKK IENTPQTKYR IGSITKTVVA 120
  121 TSILQLQEQG KLNIQDNVHT YIPSFPADKN ITLYHLLTHT SGLPEKGKGR VNPASRLNLV 180
  181 NWIGSQQLEF PAGTGWRYTD YNYMVLAYIV ETISQRPLGE YIKENIFGPA EMHESGMGNA 240
  241 MPGEQHLAKG YKKQDNLLVL APKLGMDWLY GCGEMYTTVG DMKKLDEAII NGKLLSKKSR 300
  301 QAMFTPSPER KYAYSFYIYN DYFHNHGVLA GWNTFNNFNK DKGIFVILFS NVKNSMDDDF 360
  361 NKEFRKMVSD LLEQRG

Type	Start	End	Confidence
Signal Peptide	1	17	0.96
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	376	0.99