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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89149140, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKRKIKKLT AVVAPVLAMS MALSACSTGG DKQASTNSKG DSKSGEKLAA KQVFNRTERQ  60
   61 EIPTMDTSKS TDTVGSQVLG NTMEGLYRLD KDNKPIPAAA ESSTKSEDGK KYTFKLRKEA 120
  121 KWSNGDPVTA KDFVFAWQRL LDPSTASEYA FIAYPIKNAE AINKGQAEVS TLGVKAVDDY 180
  181 TLEVELERPV PYFLNLTAFP SYYPLNEKFV KEKGDKFGLE ADTVLYNGPF VMSEWKHEQG 240
  241 WKLKKNENYW DKKTVKLEEI NYSVVKEPAT LVNLYDSGQV DFAILKGEFV DKYRNKKGEF 300
  301 GVYEQPNTFF LRLNEKRNGQ DTPLKNKNLR EAIALSVDKK DLVNVLLNDG SKAVDSLVPK 360
  361 GLAKGPDGKD FTESFKNGLK HNTKKAAAAW EKAKKELGKD EVTIELLSYD DGNARKVADY 420
  421 IKDQIEKNLK GVKINIKIQP FKQKLKLESA QDYEISYAGW SPDYSDPMTY LDMFETNSSY 480
  481 NQMSYSNPKY DEIIKQGKTE LMADAKKRWA ELGKAEKLLL EEDVALVPLF QRADAYVMKP 540
  541 NIKGVVHHNI SPEFSFKWAY VTE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle