YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89202777, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKRLTLFSF LLVFALIFAG CSTKNNSVAK KGDKLSVYTT IFPLADFTKK IGGDYVNVET  60
   61 IYPPGADSHT YEPSQKQTVQ IAKADLFVYN GAGLEPFAEK MEKTLKQENV QTVNASQGID 120
  121 LHASSEDEHH EQESDHKEHG HHHDQDPHVW LDPILAMKQA EKIKDALVKL QPEHKKEFEK 180
  181 NFAALQTKFT DLDDHFKSVV TNAKTKEILV SHAAYGYWEH RYGLKQIPIA GISSSEEPSQ 240
  241 KELAAITKTA KEHGLKYILF ETFSTPKVAE VIQKETGTKI LRLNHLATIS EDDVKKNKDY 300
  301 FTLMEENVNV LKEATN

Type	Start	End	Confidence
Signal Peptide	1	23	0.96
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	316	0.99