YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89202723, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNIYLTDRN GKLQEIDEIQ KGCWINVLHP TEEEIQFLVQ TLNVELDFIK DPLDDEERSR  60
   61 IEKEDDNALI IVDIPTVRHD EEGNSIYDTI PIGMIVMPEC FVTICLEENP IFERFINQRI 120
  121 KEXYTFKKTR FALQLLYTIS TYYLRYLKQI NRKTVDLEHQ LNKSMKNKEI FTLLGLEKSL 180
  181 VYFTTSLKAN KIVIQKLMRN NTFIKMYEDD QDLLEDVLIE NKQAIEMAEI YSNILSGMMN 240
  241 TFSSVISNNL NSVMKLLTSI TIILSLPTMV SSFFGMNVAI PLENNPHGFL VVMIICAVLS 300
  301 CSLAFIFWKK RYF

Type	Start	End	Confidence
Cytoplasmic	1	255	0.86
Transmembrane Helix	256	280	0.83
Non-Cytoplasmic	281	286	0.86
Transmembrane Helix	287	308	0.94
Cytoplasmic	309	313	0.90