YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|152976641, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERIDVLLKT FIATFGGFCG YFLGGWDTTL KVLVIMAAID YLTGVIAAGY NGQLKSKVGF  60
   61 KGIAKKVVLF LLVGVAAQLD STFGSNSAIR EATIFFFIGN ELLSLLENAG RMGIPLPQAL 120
  121 TNAVEILSNK SNKTSSEYDN KKGDVE

Type	Start	End	Confidence
Cytoplasmic	1	6	0.89
Transmembrane Helix	7	25	0.94
Non-Cytoplasmic	26	31	0.81
Transmembrane Helix	32	52	0.91
Cytoplasmic	53	61	0.86
Transmembrane Helix	62	82	0.67
Non-Cytoplasmic	83	146	0.51