YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89149695, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.64
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIDVRSQSQR APFVRRLVII ALAMSTLAAG FFLFHSFTSP AKAVANQVNI VQMASEQSKV  60
   61 ELAKQAPVKF NGQVRKVAYL TFDDGPSEFQ KEILDILKKN EIKATFFMIG SNISSHSESV 120
  121 KRLVKEGHYP GVHSMTHNYA KLYKQGQFVE EMKQAQNMVK DITGIHPKLV RCPYGSMPGL 180
  181 NQRLRDQMVV AGMKEWDWTI DSLDWKLPGN PNGVVQNVIS GANQDREVIL MHEKKQTVQA 240
  241 LQTIINDLRK KGYEFETYEE SAHFPLNFWH DNRI

Type	Start	End	Confidence
Cytoplasmic	1	12	0.62
Transmembrane Helix	13	34	0.57
Non-Cytoplasmic	35	274	0.98