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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89202028, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENKRFGVLV ATLALTMILP TGAIASSSTK TPIVASQEVA SKELEKIAAE NAALLTKSYE  60
   61 TTSVQYALID NGKLILSDQT GKNDMEGKQP LTKDTLYGIG STSKVYTAAA VMKLVDEGKV 120
  121 DLDTPVVRYI PEFKMKDKRY KRITTRMLLN HSSGLQGTTL NNSFLFKDND TYTHDILLRQ 180
  181 LSTQSLKADP GAFSVYCNDG FTLAEILVER VSGMSFTEFL HQQFTKPLKL NHTKTPQDKW 240
  241 EDEKRAGLYF PTYQGQLPIE TVNVIGTGGI SSTAEDVVRF SQLFMGQGKG ILSNKAVKEM 300
  301 EQEEYKKGMW PGAGDYVFNY GLGWDSVKLY PFNRYGIKAL AKGGDTLLQH AALVVLPEQK 360
  361 MAAAVLSSGG SSMTNQLLAT KLLLAALKEK GTIKDIKPDK SFGKPVKAKM PQAVAKKAGF 420
  421 YGNSYSHFKI EITKKGELFL PSNREEKYVY TADGSFINEK GTSKLNFVTE KNGRTYLMES 480
  481 TYKSTPGLGQ DVLTHYLAEK LEDNVLSKKT AAVWTDREGG KFYLVNEKFS SMDYLVQLIP 540
  541 LTKQITRQEG LKGYWDGRKI TGPNTAAHQI QIPVMDGRDT TEARFYTEGG KEYMQIDSSL 600
  601 YVSESNVKPL ETGQSSKVTL QSNGHAKWFT IPYAAAGKTM TVELPSKSSF AVYDEKGVCV 660
  661 NFTVVSNNNK VKLPKNGTVV FAGAPNSEFT VTLN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle