YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89201852, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFSKGDVEM NFKKILMTGA IVAATTFTSI GNAQAQITFS DLPNHHWAYK AIIELANKNI  60
   61 VFGYGDGNFG LGDEVTREQV AALMFRHFKP AEKEYYHNPY KDVSNHSTIF KKEILALTEM 120
  121 GIFAGDEKGM FRPKDSLTRE EMAQILTRAF QLDVRSEHTF SDVDRKSWAN DAISAVQSNR 180
  181 ITNGTGNGMY APKMHVSREQ YVQFLYNATL PFEKRPVANP VVKPETKPNR FANCKEANAA 240
  241 GIYDITKESP YYGKHLDRDG DGIACERKKA GK

Type	Start	End	Confidence
Signal Peptide	1	35	0.75
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	272	0.99