YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|152025458, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKKKKKKTH VPFRLNVLFL CVFLMFSAVI VRLGYVQIVH GEEYKNEVEK KENSTISNPV  60
   61 PRGKIFDRYG RSVVDNDPVR TITFTRMKGS TSEERLETAK KLADLIEVSP DKLTERDKKD 120
  121 YWLFLHKEEA KAKITKKDRE ELKEKKIDDK EVAERQRNRV TEEELNQLTE KDLEVLAIKS 180
  181 KMDGGYAMTP QIIKKQVTPK EYAVVSERLA LLPGVDTNVD WDRKYTYDDM FRSVLGGVTS 240
  241 SDEGLPKERL DYFLVRDYNR NDRVGKSYIE QQYEDALHGS KAEVKNITDK NGNILETVNV 300
  301 LKGQRGNDLN LTIDMELQKR VEEIIGKYLM KFKGSEPLLD RAFVVMMNPK NGEILSMAGK 360
  361 QLVNEDGKTE VKDFALGTMT SSYPMGSTVK GATLLTGYQT GAITPGTTLL DEPIKLKGTP 420
  421 TKSSWKTMGY INDLTALKMS SNVYMFKTAM NIAKVPYIRG GTLDIKKQAF DDMRYYFSQF 480
  481 GLGVKTGIDL PNESAGLQGS QYTPGFLLDL AIGQYDNYTP LQLAQYVSTI ANGGYRMQPQ 540
  541 IVKEIRQPAA KPDEVGKVIQ SMEPKVLNRI DMPESQIKRI QEGFRQVFND ASGTGKRYFA 600
  601 TAKYQAAGKT GTAQIPYGGD KEIGKDANGQ RKIIYNLTLV GYAPFDNPEV AFSVVVPWVY 660
  661 DDKTGINGYI GREILDAYFD LKKQALTGEE PQDEKGEKSK KQDDE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle