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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|152025722, gi...
Protein type: Transmembrane
Type Confidence: 0.72
Topology Confidence: 0.45
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKFRSRLLF TFVSLIIFIL VGLGVLLETL FENYYIEHTK ERTVKETRYV ALLVEELGID  60
   61 KVLHAQNVFT ELEEQIPISI LFVDEAKKVQ YSKSDKPVFD QKMIEELTSE TAGQKSKVIT 120
  121 KESKQSNVFY HAVFVQDAQG KQGYILVKSI IEPLKDVHQK TWGLLIVGFV IACLVVIFLG 180
  181 MKITGQYIRP IESVTKVAIE LAKGNYKARA YESHSDETGM LSKAINILAR NLQEMTLEQE 240
  241 MQQDRLHTLI ENMGSGMILI DSRGYISLVN RSYKEIFHVT DEEYLDRLYY ESFHHTEIIE 300
  301 LVEEIFMTEV KVRKQVLLPL DIERKHFEVY GAPIIGTNHE WKGIVLVFHD ITELKKLEQM 360
  361 RKDFLANVSH ELKTPITSIK GFSETLLDGA MKNQKFCEHF LHIILKESER MQDLIEDLLD 420
  421 LSKIEQQGFK LNMGNVDIKD LLEDIKMVLD KKAQDKEIVL QMDAMQHVSV IGDSSRLKQI 480
  481 FINLVHNAII YTPVGGTVSV SLFEDEQNAY VQVADTGIGI SKEEIPRIFE RFYRVDKARS 540
  541 RNTGGTGLGL SIVKHLVEAH HGMITVESKV GEGTMFTVAL PKVNL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle