YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89150449, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKTKQITIG IDGMTCSACS ARIEKVLNKL DGVEANVNVA MEQATVQYDE EEQNIEAITN  60
   61 RIKKLGYEVR TKKVNFDIEG MTCAACSNRI EKVIGKMEGI ETVTVNLAMN TATIVYKDGL 120
  121 LTIEAILDKI KKLGYKGKLQ EDVGSTKKEE QLKKKRKQLF LSILLSLPLL YTMVAHLPFE 180
  181 TGIPMPHFLM NPWVQLLFAT PVQFYIGAHF YSGAYRALRN KSANMDVLVV LGTSAAYFYS 240
  241 LYEGIKTIQE PSYLPQLYFE TSAVLITLIL VGKYFEALAK GRTTEAISKL LSLQAKDALV 300
  301 IRDGNEILIP IENVVIGDSI IVKPGEKIPV DGIVLSGISS VDEAMITGES IPVEKQVGDA 360
  361 VIGATINKNG ILTMRAEKIG KDTALASIIK IVEEAQGSKA PIQRMADIIS GIFVPIVVAI 420
  421 AIVAFLVWYF AIAPNDLPQS LEVAIAVLVI ACPCALGLAT PTSIMVGTGK GAEAGILFKG 480
  481 GEYLEATHKI NAVLLDKTGT VTKGKPEVTD VLSLQDNMLA FAASAENVSE HPLAAAIVEY 540
  541 GKQQGITLLP VEDFRAAPGH GIEARIEAQS IVIGTRKLMN EHGVNIGQFE EHMAAQEADG 600
  601 KTVMLVAIEN QFAGMISVAD TIKESSKEAI HEMKSAGIDV YMVTGDNQRT AEAIAKQVGI 660
  661 EHVYAEVLPE KKARIVEELQ HNGKQVAMVG DGMNDAPALA KADIGMAIGT GTDVAIEAAD 720
  721 VTLVGGNLKH IPQAIELSTK TMKNIRQNLF WALFYNAIGI PIAASGLLEP WVAGAAMAFS 780
  781 SVSVVTNALR LKRVKI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle