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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89150509, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQTINSKLQ TYKRLFFTVA FSSVLFFVCS FFIIIIVAKI MGPPPTLVPQ TSIFYANDDT  60
   61 VMGQSNKMQK RYNIPLEQIS PYVKEATLSI EDQRFYNHHG FDTKRIIGAI IADIKAMAKV 120
  121 QGASTITQQY ARNLYLDHDK TWKRKLLEAI YTIRLEVNYS KDRILEGYLN TIYYGHGAYG 180
  181 IEAAAQLYFN KAAKDLTLAE ASMLAGIPKG PSLYSPYLKK ERAKQRQSLI LNEMVEQGYI 240
  241 TKQQAEAAKK ERLALSSLDT KEVTEIAPYF QDAVQAALLH DVGLDEQTLQ RGGLRIYTTL 300
  301 DPKLQSIAEQ AVKDHIPKTT DIQTALVSMN PKTGEVAALV GGKDYKESQF NRAIQAARQP 360
  361 GSTFKPFLYY AALEKGFTPA TRLKSEYTVF TLGDGVSKYQ PKNYKGYYAD DFVTMAQALA 420
  421 VSDNVYAVKT NLFLGTETLI KTAKQFGITS SLQDVPSLAL GTSPVKPIEM VNAYSMFANG 480
  481 GKQVKPAFIR RVVDYEGNIL YDAHLESKQV LDKNKAFVME EMMTGMFNKK LSSYAAVTGQ 540
  541 SLLPKLSRTY AGKSGSTETD SWMIGFTPQL VTGVWVGYDQ PKPISNPAEQ GYAKRIWADT 600
  601 MEKGLDGQPK KKLKQPSDVI ALNINPENGK IATKGCPTFV KMYFTKGTEP TEYCMDHVDD 660
  661 KEDFEKISKE KKKDSWWKKY IPW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle