YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89201166, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKRVCQCII ILLAMMICTA SYIEAATNSL VEHRSTIQTA ALPQKIAYLT FDDGPNKYTS  60
   61 QILNILKQKN AKATFFVIGG RVSRYPQTTK RLIREGHYIG LHSMSHDAKR LYTGDPSILI 120
  121 SEMMQAQKIV QQVTKLNSRL VRVPYGSMPY LKKNYRDALV SAHYKLWDWT IDTYDWKSYN 180
  181 NPSAVLERVM NQSDEPVEVI LMHDSSVTVQ ILPKVIDYLQ SKGYTLLSYS PSSHVEVNFW 240
  241 KDTRL

Type	Start	End	Confidence
Signal Peptide	1	25	0.92
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	245	0.99