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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89150735, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKESLKSQFH NVRFTLFVAL AVWLKTYIIT RTSFDLKLES FMQEFILFIS PLAASLLLVG  60
   61 LALFVKGKKR NYIALGIDFV LTIILVGNVM FYGFYNDFVT LPVLGQTSNF GQLGSSVKEL 120
  121 LNYKIIVAFV DIVIFFVLLK KKQGFAKTER VSRPMRSLYF VSTIAIFFAN LGLAETERPE 180
  181 LLTRSFDRVM LVKNLGLYAH QVYDLGLQAK SSSQKAFADG SKLQETENYV KTTQSKPDPN 240
  241 MFGIAKGKNV IVVSLESLQT FLIGAKVNDQ EVTPFLNQFI KESYYFDNFF HQTGQGKTSD 300
  301 AEFLVDTSLY PLDRGAVFFT HGNNEFTATP EILRQQGYYT AVFHANNATF WNRNIMYPAL 360
  361 GYDRYYNELD YKITPETKLN WGLKDIEYFD QSIDMLKQVK QPFYTRFLTL TNHYPFTYDE 420
  421 DTKLIEPYNS GDGVFDRYMV TARYLDEAMK HFIERLKAEG IYDNSVIVFY GDHYGISENH 480
  481 NRAMAQFLGK EEITTFDHMN LQKTPMFIHV PGQKEGKTIS KPTGEIDIKP TILNLLGVDS 540
  541 SNDVRFGHDV FSPDYKGFVV LRDGSFVTDK YMYANNTFYD RMTGEVVQLP KEESQALIDR 600
  601 AQNELRMSDQ LIEGDLLRFS ESNKIKTGEV KTIIKEDKKG AE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle