YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|152023800, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHRGKGMKFV GDSRVPVVRK QNIPKDYSEY PGKTEAFWPN FLLKEWMVGA VFLIGYLCLT  60
   61 VAHPSPLERM ADPTDAGYIP LPDWYFLFLY QLLKYSYASG SFTVIGAFIM PGIAFGALML 120
  121 APFLDRGPER RPLKRPVATG FMMLAIASIV YLTWESVAHH DWEAAKKQGE IVKTVQVDKN 180
  181 DEGYKLLEKN TCLTCHGDNL QGGAAAPALQ NLTLKPEEIA KIAKEGKGAM PKGVFKGTDE 240
  241 ELKKLSEFIA KYNEK

Type	Start	End	Confidence
Cytoplasmic	1	45	0.88
Transmembrane Helix	46	64	0.93
Non-Cytoplasmic	65	97	0.85
Transmembrane Helix	98	124	0.82
Cytoplasmic	125	135	0.84
Transmembrane Helix	136	154	0.89
Non-Cytoplasmic	155	255	0.90