YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GPDA_BACCN
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKITVIGAG SWGTALAMVL ADNGHDVRIW GNRPELMDEI NTKHENKRYL PGITLPSTIV  60
   61 AYSSLEEALV DVSTVLLVVP TKAYREVLQD MKKVISGPMT WIHASKGIEP GTSKRISEMI 120
  121 EEEIPEHLIR DVVVLSGPSH AEEVALRQAT TVTSAAKRME AAEEVQDLFM NHYFRVYTNP 180
  181 DIIGVELGGA LKNIIALAAG ITDGLGLGDN AKAALMTRGL TEIARLGRKM GGNPLTFAGL 240
  241 TGMGDLIVTC TSVHSRNWRA GNMLGKGHSL EEVLDSMGMV VEGVRTTKAA YELAEKMEVE 300
  301 MPITAALYDV LFNGKNVKDA VGSLMGRVRK HEVEAIPDLS R

Type	Start	End	Confidence
Signal Peptide	1	21	0.96
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	341	0.98