YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|152025329, gi...
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKLRLEHFR KIIGICLLVS LVFIVCFKPL RTFISFPKQL VIFEGEQSEI ESLPVFQASS  60
   61 TNHNVFTVSS KQKAPGIMVN SHQNGEADMV FQLAGFPVKK VNVKVLKDFK VIPGGQSIGV 120
  121 KLNTKGVLVV GHHLIQTEKG KVSPGELAGV QVGDMITAIN GKTIERMSDV APFIHSSGET 180
  181 GEPLHLVLLR DGKHIRTKLT PQKDSGESSY RIGLYIRDSA AGIGTMTFID PNSMKYGALG 240
  241 HVISDNDTKK PIQVEDGQIM RSTVTSIERG SHGNPGEKLA KFSPDHEVIG NITTNSPFGI 300
  301 FGKLNTNVKN GIMDKAMPIA LSHQVKEGPA KILTVIDNDK VESFDVDIVS AVPQKFPATK 360
  361 GMVIKVTDKR LLEKTGGIVQ GMSGSPIVQN GKVIGAVTHV FVNDPTSGYG VHIEWMLHEA 420
  421 GINIYEQNKK AS

Type	Start	End	Confidence
Cytoplasmic	1	11	0.73
Transmembrane Helix	12	30	0.81
Non-Cytoplasmic	31	432	0.99