YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89151285, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKKQRILFI GAGRMAEAIF SGLLKTSKPY IEEIIVSNRH NTKKLQQLQE QYPISTTTDW  60
   61 KECVKFVDTI ILAMPPAAHE QLLTELAPLL THQLVVTIAA GIGPSYLEKR LPHGTPVAWI 120
  121 MPNTAASIGQ SISLYTTGHF VNENHKETLQ LLLKGIGTSQ LCTEEEIHQL TAITGSAPAF 180
  181 LYHFAESLIE ATKNYGIDET TAHHLVIQMI AGAATMLGQV QNPALLREQV TTPGGSTAEG 240
  241 LKVLYEHHFS KIIQQAIEAT NKKVRGK

Type	Start	End	Confidence
Signal Peptide	1	18	0.74
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	267	0.97