YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|152974703, gi...
Protein type:	Transmembrane
Type Confidence:	0.82
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVGILGIGR YVPEKVVTNH DLEKIMDTSD EWIRTRTGIS ERRIADDTID TSYMAVEASK  60
   61 KAIEDAGITG EDIDLILVAT VTPDHSFPAV ACMVQEQIGA THAAAMDLSA ACAGFMYGMI 120
  121 TAQQFIQTGT YKHILVVGSD KLSKIVDWKD RNTAVLFGDG AGAVVMGAVS DGKGILSFEL 180
  181 GADGRGGKHL YQDEYVMMNG REVFKFAVRQ LGDSCLHVLD KAGLTKADVD FLVPHQANIR 240
  241 IMESARERLD LPQEKMSKTI EKFGNTSASS IPIAMVEELE KGRIQDGDLI ILVGFGGGLT 300
  301 WGAVALRWGK

Type	Start	End	Confidence
Non-Cytoplasmic	1	288	0.65
Transmembrane Helix	289	309	0.71
Cytoplasmic	310	310	0.48