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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89200427, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKNNSYKKV IAGTMTAAMV AGVVSPVAAA GKTFPDVENH WSKDSVYYLV EKGAIKGNDD  60
   61 GTFAPDRTVT RAEAATMMAQ ILNLKIEENA KPSFKDAQDH WASKFIAAVE KAGVVAGKGD 120
  121 GTFDPNGKID RASMAAMLVG AYKLDSKVSG ELKTKFDDLK NHWGEKKANI LVELGISVGT 180
  181 GSAWEPNKSV TRAEAAQFIA NTDKKFGAAA KVDSAKVATS QKLEVKFDKA VEKLTKEDVK 240
  241 VANKANNDKV LVKDVTLSED KTTATVELYG KLEAKQTYTV DVNNVGKTEV TVGSLEPKTI 300
  301 EMADQTVVAG KATKLQYKVT DENGTEIVSP TGIEFETPAA EGTIKNGEIT LAKGTSTTVK 360
  361 AVYKKGGKVV AESKTVKVSA EGATVASISN WTVTEQNKAD FTSKDFKQNN KVYEGDNAYV 420
  421 QVELKDQFNV VTTGNVEYES LNTEVAVVDK ATGKVTVLSA GKAPVKVTVK DENGKELATK 480
  481 TVEIETFAKK AMNEIKLEKT NLTLSTKDVT DFKVEAPVLD QYGKDFVADK VEVKVYDKDG 540
  541 KELKEHALKA DYKNKELVVN SNGQKAGKYT VELTAISGEK EVKAKLALEL KDPGLFSKFE 600
  601 VRGLENELDK YVTDEHKKNE MTVSILPVDA NGLVLNGAEK AKLEVTTTDK EGKEVPATSA 660
  661 QISVQDNRVI TVGTAAKAGE TYKVAVKLAD GKLITTHSFK VVDTAPAAKK LAVEFTSTTL 720
  721 KDVAPKADLK AELANILSVD NVPATEASAT VTDVKFVSAD TNVVADETGL FGEKGSTSVF 780
  781 VKELTVKKGE KTQKVEFDKP VRVAVIY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle