YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89200339, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.80
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSKKSRKGK KKKHEEHIDE TWLIPYSDML TLLFALFIVL FAMSSIDAAK FKQMALSFRS  60
   61 ELAGGTGNKE FLSDQKPKKK EELSTDSLEA ENIKKQATEK AEAEVKQREM NELKAVQKSI 120
  121 DQYIEERQLS SSFKTKLTEQ GLMITILENV LFDSGKADVK PESLNIANEM SHLLLSAAPR 180
  181 EITVSGHTDN VPITNSQFSS NWELSTQRAV NFMQVLLQNK QLDPAKFSAT GYGEYRPATS 240
  241 NDTSEGKAKN RRVEVFILPL QGTIK

Type	Start	End	Confidence
Cytoplasmic	1	20	0.71
Transmembrane Helix	21	43	0.74
Non-Cytoplasmic	44	265	0.90