YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89200332, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKSTFKWLA CVTVSTALLS GCGLLNKENE IEQIDPPKKV SYTDGGKKEV TMKEKQGQTI  60
   61 QRELYLVDKN GYVVPQTLAL PIPKQSEVVK QTLEYLVKDG PVENILPNGF RAVLPADTTM 120
  121 TVDLKKDGTA VIDFSKEMQN YKKEEERQIV ESVAWTLTQF KDIKQVKFQM NGEKLTKMPV 180
  181 GGTPLGESVS RADGINFDDE QITDVTNTKP VTLYFMAQNN KRQYYVPVTR RVAEEKENEV 240
  241 ETIINELVKG PSHSSLLNDF NPGVKLVSEP KIQDGKVTLN FNENIYANKD KNMISNYVLQ 300
  301 SLVLSLTEKQ GVKNVSVEVN GKANLMNEEG EKLIKPVQRP QNVNTGSF

Type	Start	End	Confidence
Signal Peptide	1	23	0.98
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	348	0.99